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gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes
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Uncovering Sequence and Structural Characteristics of Fungal Expansin‐Related Proteins With Potential to Drive Substrate Targeting
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Draft genome sequence of Clostridium tetanomorphum DSM 4474T isolated from a septic wound
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research enabled by the JGI … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … as a demonstration of how JGI’s capabilities — and their applications — are evolving. “JGI is famous for its work …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of … Impact By collecting and sequencing dominant haloarchaeal sequences from six hypersaline lakes, researchers focused on … conditions, information that could have biotechnological applications. The work has been enabled through the JGI …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … biosensors may eventually lead to ways to improve cellulose-based biofuel synthesis. Additionally, it opens the door to … Ec YcgR, within the Nano-lantern scaffold. They then mined sequence databases for homologous YcgR proteins and chose a …
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Microbial life under ice: Metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice‐covered Lakes
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
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Sediment microbial communities in Great Boiling Spring are controlled by temperature and distinct from water communities
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Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest
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Rapid Response of Nitrogen Cycling Gene Transcription to Labile Carbon Amendments in a Soil Microbial Community
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Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales
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