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… of where those binding sites are in the genome — those sequences are moving around, disappearing and appearing in … have profiled over 160,000 high-quality single-nuclei transcriptomes, enabling the identification of dozens of …

… Coclet C, Camargo AP, Roux S. (2024) MVP: a modular viromics pipeline to identify, filter, … and bin viruses from metagenomes. mSystems 9:e00888-24. https://doi.org/10.1128/msystems.00888-24 Coclet, C., …

… 1) complementation of split luciferase (CSL) and, 2) bioluminescence resonance energy transfer (BRET)-based … Ec YcgR, within the Nano-lantern scaffold. They then mined sequence databases for homologous YcgR proteins and chose a … These 92 homologues were synthesized as codon optimized sequences and cloned into the Nano-lantern scaffold. Because …

… conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … diseases are well known to be partially due to the DNA sequence that makes up an individual’s genome. The genes of … Grant GBMF3834 and Alfred P. Sloan Foundation Grant 2013-10-27 (to the University of California, Berkeley …

… big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … the process hinges on referencing to existing genome sequences.  Some of these proteins are what the scientists … artificial intelligence to decode the language of protein sequences and obtain hints of their possible functions. Yet …

… genomes of uncultivated giant viruses from environmental sequences across the globe, then using these sequences to make inferences about the biogeographic … out and characterize uncultivated viruses. For instance, a 2018 study from a JGI-led team uncovered giant viruses in …

… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … discovery and applications. This program has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni … efficient than glycolysis., Nature Chemical Biology , 2024 Dubinkina et al., A transcriptomic atlas of acute …

… community able to not just analyze but also create DNA sequences mimicking an array of microbial life. By … is capable of discovering and modelling complex biological sequences such as biosynthetic gene cluster structures. … conducted by JGI users. These datasets include an extensive 25-year study of microbial communities in freshwater …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to develop … Publication: Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of …

… under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and … in a wide range of research fields. A public repository of 52,515 microbial draft genomes generated from environmental … of metagenome-assembled genomes (MAGs) directly from sequenced environmental samples without needing to cultivate …

… for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily …

… are.” But according to a new study published September 16, 2021 in Nature Communications , warmer waters and … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … After isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the …