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Genomic prediction of switchgrass winter survivorship across diverse lowland populations
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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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Targeted genetic manipulation and yeast-like evolutionary genomics in the green alga Auxenochlorella
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2025 Progress Report
… Mi Yan, Deanna Beatty)    Vision  Lead AI-driven genomic innovation to advance biotechnology. Mission  As a U.S. Department of Energy Office of Science user facility supported by the … Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … control over reproduction was a likely key to this evolutionary transition. Using this model, researchers also … at Cornell University and scientists at the Joint Genome Institute, a DOE Office of Science User Facility was …
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Toward More Efficient Artificial Photosynthesis
… (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that …
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Comparative analysis of the transcriptomes of Populus trichocarpa and Arabidopsis thaliana suggests extensive evolution of gene expression regulation in angiosperms
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Gene duplication, horizontal gene transfer, and trait trade-offs drive evolution of postfire resource acquisition in pyrophilous fungi
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering Group lead.   The group is responsible … and supporting applications that span the lifecycle of activities at JGI - proposal submission and review, … sequence quality control and automation of microbial/metagenomic assemblies, portals that make data available to the …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell …
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