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… In April 2020, we mark both the 50th celebration of Earth Day …   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… Uncovering associations between plant roots and fungi that can help or … host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …

… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the … mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to D.H., the GENOBIOREF …

… Sustainable Berkeley Lab maintains a  calendar of Earth Month … striving for sustainability in lab spaces as well as offices. These efforts dovetail into sustainability … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… High-throughput stable isotope probing helps ID novel interactions between … The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) …

… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative …

… Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …

… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), … to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …

… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … development of novel computational tools to identify virus sequences, the design of new experimental approaches to link … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for …

… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …

… Cas14 proteins discovered from JGI’s IMG/M database and … Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … Institute (JGI), a DOE Office of Science User Facility. The sequences were then biochemically characterized by a team …

… In this episode, undergraduates adopt genomes that the JGI sequenced, but never … and Mark Soghomonian share what it was like to take on one of these genomes.  …