Results

Genome Sequencing Suggests Diverse Secondary Metabolism in Coral-Associated Aquimarina megaterium
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Section-level genome sequencing and comparative genomics of Aspergillus sections Cavernicolus and Usti
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… with excitement and determination as they came onsite. From data carpentry to science communications, their … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and mentor Juan C. Villada, Ecology & Evolution of Self-Catalytic Introns across Earth’s …
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The Power of One, Amplified
… single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring sediment sample. … snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large mixtures of genomic sequences. A complementary approach to this is single cell …
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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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Genome analysis of ‘Candidatus Ancillula trichonymphae’, first representative of a deep‐branching clade of Bifidobacteriales, strengthens evidence for convergent evolution in flagellate endosymbionts
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Directed Evolution of Flavin-Dependent Halogenases for Site- and Atroposelective Halogenation of 3‑Aryl-4(3H)‑Quinazolinones via Kinetic or Dynamic Kinetic Resolution
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Statement on the Use of Genomics Data
… the HGP, the JGI has sustained its commitment to uploading sequence data generated on behalf of its user community to … first. For nearly 40 years, the International Nucleotide Sequence Database Collaboration (INSDC) has managed the … to be moved to private status. This will remove records from search indexes and BLAST databases until such time that …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over evolutionary time. They also discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public …
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Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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