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Transcriptomic data sets for Novosphingobium aromaticivorans DSM12444 and a ΔSARO_RS14285 mutant grown in the presence of glucose and either protocatechuic, vanillic, syringic, or 4-coumaric acid
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Building Sphagnum Genomic Resources
… is an unassuming plant, but it thrives in nutrient-poor, acidic and waterlogged environments, occupying every … metagenome-assembled genomes for seven novel species of Acidobacteria through an approved CSP proposal. The …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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An Integrated Dataset to Understand Ecosystem Interaction
… generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… reference genome built off more than a decade of work; as sequencing technologies advanced, assembly and annotation of …
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Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria
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Pinning Down a Piece of Photosynthesis
… parts. A lot of these moving parts are proteins — amino acid structures that harvest light, transport molecules and … an array of experiments at universities and national user facilities, researchers found that this protein detects iron … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory …
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A Complex Confection Decoded: Sugarcane Reference Genome
… works in sugarcane could help protect other crops facing similar pathogens. Summary Many plants, sugarcane … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory … sugarcane was published as a step forward in this effort. Sequencing and assembling the genome required a custom …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National … Park include a wide range of temperatures, levels of acidity and geographical features, and the archaeal lineages …
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Ian Blaby
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Defining a Pan-Genome for Antarctic Archaea
… hypersaline Antarctic lakes. The Impact By collecting and sequencing dominant haloarchaeal sequences from six … DOE Joint Genome Institute, a DOE Office of Science User Facility, microbial ecologist Rick Cavicchioli and his team … Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the US …
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Methane Makers in Yosemite’s Lakes
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