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Complete Genome Sequence of Methanoregula formicica SMSPT, a Mesophilic Hydrogenotrophic Methanogen Isolated from a Methanogenic Upflow Anaerobic Sludge Blanket Reactor
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Genome Sequence of Victivallis vadensis ATCC BAA-548, an Anaerobic Bacterium from the Phylum Lentisphaerae, Isolated from the Human Gastrointestinal Tract
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Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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High-Quality Draft Nuclear and Mitochondrial Genome Sequence of Fusarium oxysporum f. sp. albedinis strain 9, the Causal Agent of Bayoud Disease on Date Palm.
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Using DNA affinity purification sequencing (DAP-seq) to identify in vitro binding sites of potential Novosphingobium aromaticivorans DSM12444 transcription factors
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv University in Israel, the … and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools have … working on RNA virus mining. After a couple of virtual meetings of the three teams it was clear that a larger …
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Evolution of a Fungal Gene Expression Regulator
… (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University of Georgia and including … of life, they tracked the evolution of 5mC pathways across 528 species. The researchers found that unlike most flowering … specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference genomes …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer … (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … global ecological and environmental processes, especially by modifying host cell metabolism and altering cell fitness. …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences … what can be requested in a proposal? A:  Yes, but the ceilings vary depending on the requests. Please contact EMSL and … single cell capabilities range from traditional single cell sequencing and mini-metagenomics to more targeted …
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Doubling Down on Known Protein Families
… a novel approach to better understand microbial communities by looking at protein function within them. The work was led … to the deep sea are capable of doing a lot of unique things when it comes to energy cycles — turning biomass into … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… garden, switchgrass plants clonally propagated from cuttings represent a diverse collection sourced from half of the … As  reported January 27, 2021 in  Nature , the team led by researchers at the University of Texas (UT) at Austin, … by DOE’s Bioenergy Research Centers, which initiated the sequencing of the switchgrass genome. DOE’s  Billion Ton …
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