Search

… This summer marked the first fully in-person internship experience in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 … work, but the opportunity to collaborate with and learn from fellow researchers onsite as well. …

… a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the … threatens this important crop. Hear more about that work from researchers Gary Stacey (University of Missouri), Peter …

… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the story behind that giant assembly from Lake Mendota. In this episode: the software evolution …

… MGEs, that can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into … Bagby (Case Western Reserve University) and Simon Roux (JGI) as they talk about their recent work on a time series from Sweden’s Stordalen Mire. …

… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced …

… Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing libraries from …

… Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to … young in structures called galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these …

… The ocean depths are vast and dark. But there are hotspots on the … thrive, and even support entire ecosystems. Hear from researchers Anna-Louise Reysenbach, Emily St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how they’ve adapted …

… Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …