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… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … associated genes are great resources for bioremediation, new agricultural applications or life-saving drugs. A better … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern …

… team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in …

… Protein annotations provide insights into environmental tendencies The … tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein … Those similarities, based on their ratios of small DNA sequence fragments called tetranucleotides, are a way to …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … mycorrhizal species. The 62 mycorrhizal species include 29 newly-sequenced mycorrhizal genomes. With so many fungal  …

… can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into light, and opening up new options for engineering these microbes in the future. Join Sarah Bagby (Case Western Reserve University) and Simon Roux (JGI) as they talk about their recent work on a time …

… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … DNA floats freely within the cytoplasm of their cells. This newly discovered species of bacteria keeps its DNA more … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …

… Maureen is currently developing new high-resolution and high-throughput methods to link uncultivated viruses to their host. With these new methods, she hopes to expand our understanding of the …

… and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the … affect a microbe’s ability to cycle nutrients or produce new chemicals. They can also affect ecosystems by killing …

… zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … a foundational data set that is now available through a new  single-cell data viewer that was collaboratively …

… In honor of the JGI's 25th anniversary in 2022, we have … to provide a cataloged and curated culture and genome sequence resource of rumen microorganisms . Thanks to the … in themselves. For example, a few organisms originally sequenced in the Hungate1000 collection harbor enzymes that …