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Polar Phytoplankton Need Zinc to Cope with the Cold
Science Program (CSP) .  Through this collaboration, in 2017, they published the first genome sequence of a … on microalgal communities across different ocean latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of evidence showing that …
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Tracking the Origins of Methane-Producing Microbes
… three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); … user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform … small pools of cells that were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging … this symbiosis could improve the way soils store carbon from the atmosphere. For plants, boosting this relationship …
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The More the Merrier: Making the Case for Plant Pan-genomes
… base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies from additional parents or duplication, also known as … team studied  Brachypodium hybridum , a polyploid resulting from the combination of the genomes from the diploids  B. …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging … this symbiosis could improve the way soils store carbon from the atmosphere. For plants, boosting this relationship …
Learn more
The Soil Blooms Green
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… meeting brings together established and emerging scientists from academia, industry, and government organizations for …
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JGIota: Looking Back at Sequencing for Soybeans
… crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence … threatens this important crop. Hear more about that work from researchers Gary Stacey (University of Missouri), Peter …
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Creating an Energy Market for Miscanthus
Miscanthus will need some upgrades. In this episode, hear from scientists working on understanding Miscanthus biology …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, …
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JGI Accepts 17 Proposals for Community Science Program
… (Berkeley Lab). They were selected through peer review from 41 full proposals out of 50 letters of intent … in the Antarctic Peninsula. Additionally, the proposal from Viola Krukenberg at Montana State University successfully evolved from a white paper approved through JGI’s CSP New …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) … % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 Total 700.0     8,585     Q1 2025 175 190.304 109% … Hours reflect a delay in implementation of the LIMS from Q2 to Q3. As a result of the delay in the LIMS …
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