Results

JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many more meetings and … idea was to put together a ‘Best of the Best’ genome sequence list, which I found utterly frustrating and … 25 years span a broad, colorful range. Behind every genomic sequence, Anderson said, there’s both a larger story and a …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… be measured by IR-spectroscopy and mass spectrometry in sequence in real time at an atomic resolution. We are … at the University of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team … occurring ploidy levels, called cytotypes, across the species. These are primarily tetraploids (4X or four copies of the genome) and octoploids (8X or eight …
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High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
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Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279T), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia
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Genome Sequence of Kosmotoga olearia Strain TBF 19.5.1, a Thermophilic Bacterium with a Wide Growth Temperature Range, Isolated from the Troll B Oil Platform in the North Sea
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Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park
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Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome
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Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… and Gene Integration . ACS Chem Biol. 2019 Apr 19;14(4):704-714. doi: 10.1021/acschembio.8b01107. Epub 2019 Apr … transcriptome analysis and 8 replicates for metabolomics. Why is this? A:  We did a pilot experiment with the JGI to …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… on Olpidium was from agricultural research. Several species of Olpidium are obligate endoparasites of some … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong …
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JGI & KBase at PAG XXVII
… of talks relevant to JGI science at PAG XXVII. On January 14, JGI Plant Program head Jeremy Schmutz and  KBase Co-PI … integrative biology. Researchers who are applying genomic sequence information to BER-funded activities of plant … Response 7:27 PM Highlights from Genome of Miscanthus 7:45 PM Transcriptome Changes during Leaf Senescence in  …
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