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Mining Metagenomes for Cas Proteins
… was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools … and Nanohaloarchaea. This work represents an excellent showcase of the unique capabilities provided from …
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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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Genome sequence of the Litoreibacter arenae type strain (DSM 19593T), a member of the Roseobacter clade isolated from sea sand
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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An Automated Tool for Assessing Virus Data Quality
… vary widely. In a previous effort, an international consortium recommended specific guidelines and best practices … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … from IMG/VR , a database that is part of the Integrated Microbial Genomes & Microbiomes (IMG/M) suite, as well as …
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JGIota: Looking Back at Methane-Making Microbes
… 2010, the JGI has supported researchers studying those microbial methane-makers. Eventually, that could help us …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
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Benjamin Cole
… In addition, Dr. Cole is focusing on how individual plant cells respond to their biotic environment using emerging single-cell characterization technologies (scRNA-seq, Spatial … Implementation of the Index of Cell Identity as an R package …
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Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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Olpidium, The Key to the Origin of Terrestrial Fungi
… seven years later. In 2018, as members of the ZyGoLife consortium , my colleagues and I decided to re-visit the … known fossil record of land plants and evolved in early microbial biocrust environments.     …
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A Grass Model to Help Improve Giant Miscanthus
… genes provided by these chromosomes can contribute to novel traits. M. sinensis is a tetraploid, with four sets of …
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