Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
Results
Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?
The Genome of Akkermansia muciniphila, a Dedicated Intestinal Mucin Degrader, and Its Use in Exploring Intestinal Metagenomes
Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri
Extreme overall mushroom genome expansion in Mycena s.s. irrespective of plant hosts or substrate specializations.
Genome mapping of quantitative trait loci (QTL) controlling domestication traits of intermediate wheatgrass (Thinopyrum intermedium)
MetaBAT 2: an adaptive binning algorithm for robust and efficient genome reconstruction from metagenome assemblies
GenomeVISTA—an integrated software package for whole-genome alignment and visualization
Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis
Genome‐wide scans of selection highlight the impact of biotic and abiotic constraints in natural populations of the model grass Brachypodium distachyon