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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , one of DOE’s highest honors! Tringe, a microbiologist, was … assemblies, revealing the roles of microbial communities in carbon cycling, in interactions with plants, and as drivers …
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … technologies for  biofuels and other bioproducts. Finally, understanding how brown rust disease resistance works in … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), with assistance from partners at …
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Forest Fungi, Seagrass, and a New View of Symbiosis
Three stories of JGI-supported research, connected to nutrient cycles. … Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their … also holds an Adjunct Scientist appointment at the Bigelow Laboratory for Ocean Sciences since 2012 and an Adjunct … User Programs … Education … Awards and Service … Selected Publications …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a JGI Engagement: Accessing … capabilities in just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS …
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … user facility located at Lawrence Berkeley National Laboratory, and add additional gene function descriptions. … allowed us to pinpoint and rank biologically relevant and evolutionarily conserved genes that could be potential …
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Green Algae Reveal One mRNA Encodes Many Proteins
… a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers … genes are encoded on a single molecule of mRNA – in two species of green algae, Chlamydomonas reinhardtii and … (UC), Berkeley, UCLA, UC Davis, Brookhaven National Laboratory, Lawrence Berkeley National Laboratory, the U.S. …
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Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050T (DSM 19838T) and Gramella portivictoriae UST040801-001T (DSM 23547T), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Transcription factors control …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who … genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will … the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function. Tapping into …
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The Surprising Structure of a Shrub Willow Sex Chromosome
A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, … some, including shrub willow  Salix purpurea , employ the evolutionary strategy we are far more familiar with: … team, which included scientists from Oak Ridge National Laboratory and the U.S. Department of Energy (DOE) Joint …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … layers. The architecture of these algorithms, inspired by communication networks found in nature, allows …
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