Search

… equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate … the JGI’s eukaryote research efforts expanded to include basal metazoans and plants. Working with a talented team of … et al., 2023.The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type plus and minus strains …

Originally from northern California and one of the first students to participate in the DOE Joint Genome … was coalescing. Lawrence applied for and was accepted as one of the first interns in the program . “There … or computational biologists who were contributing to cutting edge developments in machine learning. Despite …

… discovered and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …

… the infected microbial cells as virocells, a change in name first described in 2011 which reflects the metabolic changes … predictive ecosystems models, University of Michigan’s Melissa Duhaime and The Ohio State University’s Matt Sullivan … resulting virocells, to better represent how infections occur in natural settings. … A portion of this research was …

… availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this polar … the polar regions to the deep ocean, cold environments occupy more space on Earth than any other ecosystem. … producers fueling our planet’s biogeochemical cycles. Water samples from Ace Lake were collected over a 10-year period …

… earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … Amplification to generate enough DNA to put on a sequencer. As previously mentioned, it’s a method that’s … users can request this capability when  submitting a proposal . … U.S. Department of Energy Joint Genome Institute …

… wild mushrooms, until Ronald D. Ower, a researcher from San Francisco State University, developed a technique to successfully obtain fruiting bodies of morel in walk-in growth … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome …

… enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or as an … samples of poplar and soil from Washington and Oregon. The cuttings included genotypes from the DOE BioEnergy Science … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, …

… a multi-institutional team of researchers collected soil samples from a wildfire that burned at the Colorado-Wyoming … builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful snapshot of what soils … … This work was supported through a USDA NIFA award (2021-67019-34608) to M.J.W. FTICR-MS analyses were performed …

… different campuses with this being our largest and most successful one. It’s proven to be a really good model for us … be a part of it all. Among them was Travis Lawrence , the first graduate student intern from the 2014 cohort. After … to pass along my knowledge to them as best as possible in a safe environment” This not only helped her be successful as …

… of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater ecosystem works.  …

…   focused on a class within  Chloroflexota called  Dehalococcoidia . Some  Dehalococcoidia have a knack for degrading … applications including biofuel production. … The work (proposal:  https://doi.org/10.46936/10.25585/60000691 , and  …