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Frederik Schulz
Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Roux …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once … to inform the engineering of stable, synthetic microbial communities to take advantage of their joint metabolisms. …
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Measurement of bacterial replication rates in microbial communities
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Simon Roux
… development of novel computational tools to identify virus sequences, the design of new experimental approaches to link … and evolutionary drivers of virus-host dynamics in soil microbial communities. … B.S. in Microbiology, Université Blaise …
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Silicon-rich soil amendments impact microbial community composition and the composition of arsM bearing microbes
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Community structure explains antibiotic resistance gene dynamics over a temperature gradient in soil
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Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil
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Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… is only available for a fraction of extant actinobacterial diversity. The article adds to the compendium … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA …
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Genomic Features Predict Bacterial Life History Strategies in Soil, as Identified by Metagenomic Stable Isotope Probing
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Exometabolite niche partitioning among sympatric soil bacteria
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Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment▿ †
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