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The Sequence to Function: Applications and Analysis for the …

A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using samples … University of Texas at Austin, HudsonAlpha, and the JGI. Building off this work, researchers at three DOE Bioenergy … paper on the release of the high quality reference genome sequence of green millet ( Setaria viridis ). The team of …

UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …

… impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program. … first legume species with a published complete draft genome sequence. At the time, the vital global source of both … of seed oils as biofuel. After analyzing the original sequence, Gary Stacey of the University of Missouri said he …

By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years after the JGI united … the genomics expertise of three national labs in one long building at Walnut Creek, after countless generations of … shipped to, and then installed at the  Integrative Genomics Building , JGI’s newly-built home located in the heart of …

… of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural similarities in proteins that low sequence identity may belie. The technology he’s using is … Deep learning algorithms can vectorize faces… … so, why not proteins?         … The U.S. Department of Energy …

… of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … ecotypes because, historically, they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA … bioinformatics tools designed for analysis of DNA and RNA sequence data.  … Datasets … BBTools …