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… Questions about the transition from Phytozome v12 to v13. Why is it necessary to retire Phytozome v12? The codebase … are now much more powerful and flexible tools available for building high performance user interfaces and backend data … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …

… The Sequence to Function: Applications and Analysis for the …

… development, dozens of reference genomes and thousands of resequenced sorghum varieties, a resource for breeders and … high-quality reference genomes. By cataloguing a genome sequence for a line of sorghum, reference genomes have … plant variation for future analysis and discovery. “We're building the data sets that are needed to build the …

… of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … ecotypes because, historically, they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA … bioinformatics tools designed for analysis of DNA and RNA sequence data.  …

… of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and … resource hub that provides access to publicly available sequenced algal genomes and genome annotations generated by …

… A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using samples … University of Texas at Austin, HudsonAlpha, and the JGI. Building off this work, researchers at three DOE Bioenergy … paper on the release of the high quality reference genome sequence of green millet ( Setaria viridis ). The team of …