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… collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom …

… (Neocallimastix californiae) on sorghum, switchgrass and poplar, then monitored changes to the plants’ lignocellulose …

So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into soybean’s …

… dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To … for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil … in the environment. The Impact Dubbed “the” bioenergy tree, poplars are known for their genetic diversity. They hold …

… to as natural products, the proposal includes plans to sequence several thousand Actinobacteria strains and then … through photosynthesis, but only a fraction have been sequenced.  Adriana Lopes dos Santos from Singapore’s … which species of mycorrhizal fungi are important for poplar plant health, in part to learn how these species can …

… of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and … resource hub that provides access to publicly available sequenced algal genomes and genome annotations generated by …

Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … Science Group supports researchers exploring how to convert sequence into functional assessments. The team has a … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …

… than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … After isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the microbes. And in order to …

… (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … and those previously grown for the DOE candidate feedstock poplar. “You’re collecting natural diversity and you’re … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …

… of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural similarities in proteins that low sequence identity may belie. The technology he’s using is … Deep learning algorithms can vectorize faces… … so, why not proteins?         … The U.S. Department of Energy …

The Sequence to Function: Applications and Analysis for the …