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Microbial ecology of an Antarctic hypersaline lake: genomic assessment of ecophysiology among dominant haloarchaea
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Jane Grimwood Named HudsonAlpha Genomics Chair
… who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using samples …
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Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a … and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, …
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JGI Scientists Pen Genome Watch Articles
Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … hot topics in genomics.” And it makes sense to Woyke why JGI would have this role. “We work with leaders in …
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Learning to Look
… to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … and a unique chronic infection cycle. “We’re not sure why we systematically manage to miss them; maybe it’s due to … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What …
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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This … workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides …
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A genetic survey of heavily exploited, endangered turtles: caveats on the conservation value of trade animals
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Partnerships Development Team
… works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT … sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. Click to … genome engineering (CRAGE), which offers single-step genomic integration and prototyping of complex pathways. The …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … Amplification to generate enough DNA to put on a sequencer. As previously mentioned, it’s a method that’s …
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