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The Sequence to Function: Applications and Analysis for the …

Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … to their involvement with the 1KFG project. Over 1,000 species have been nominated for the project by more than 100 … three times the size of the human genome. There are four more fern genomes in progress. One unique aspect of …

So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into soybean’s …

… mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … from the Americas to trace the evolution of Lentinula species.The Lentinula genus diverged roughly 28 million … Asia. Afterward, Lentinula groups evolved further, to four major groups: a lineage in Australasia and L …

Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … Science Group supports researchers exploring how to convert sequence into functional assessments. The team has a … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …

UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …

… of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural similarities in proteins that low sequence identity may belie. The technology he’s using is … Deep learning algorithms can vectorize faces… … so, why not proteins?         … The U.S. Department of Energy …

… crop varieties grow best in certain regions. Most plant species have adapted to their local environments; for … (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …