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Metabolomics
… samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as different types …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of biomass … years evolving tactics against potential threats. “Because plants can’t run away, they’ve evolved these really tough … engineer at the University of California Santa Barbara. So plants don’t break down without a fight, but it’s an …
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JGIota: The Algae Nicknamed ‘Chlamy’
… – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …
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Genome sequencing provides insight into the reproductive biology, nutritional mode and ploidy of the fern pathogen Mixia osmundae
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Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen Phytophthora capsici.
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Non-contiguous finished genome sequence of the opportunistic oral pathogen Prevotella multisaccharivorax type strain (PPPA20T)
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … in various shades of white. To researchers searching for sequences of RNA viruses in large data sets, their work may … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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Comparative genomics of the extremophile Cryomyces antarcticus and other psychrophilic Dothideomycetes
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JGI on the 2020 Highly Cited Researchers List
… that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature … machine learning to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by lifestyles. … of 135 fungal sequenced genomes to understand how plants and fungi developed symbiotic relationships, and how …
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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
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Analysis of Plant Pan-Genomes and Transcriptomes with GET_HOMOLOGUES-EST, a Clustering Solution for Sequences of the Same Species
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Complete Genome Sequence of the Plant Growth-Promoting Endophyte Burkholderia phytofirmans Strain PsJN
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