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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … of Wu, Seshadri, Nikos Kyrpides and Natalia Ivanova conducted a census of publicly available bacterial and … Microbial Genomes & Microbiomes (IMG/M) database. In their analysis, the team found that bacterial isolate genomes …
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Comparative Genomics Using the Integrated Microbial Genomes and Microbiomes (IMG/M) System: A Deinococcus Use Case
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Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris
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Comparative and transcriptional analysis of the predicted secretome in the lignocellulose‐degrading basidiomycete fungus Pleurotus ostreatus
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Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
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Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)
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You Can Move, But You Can’t Hide
… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … software was created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the … users to import their data and access the geNomad tool to conduct their research. Designed to reduce the effects of …
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Understanding Wildfire Recovery, Starting in Soil
… which microbes in the soil persist after a wildfire — and why they thrive — gives forest managers more avenues to … fungi, bacteria and viruses survive. With this metagenomic analysis, it was possible to identify specific attributes — … of Colorado Boulder and Colorado State University. The work conducted by the US Department of Energy Joint Genome …
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Microbiome Engineering: Synthetic Biology of Plant-Associated Microbiomes in Sustainable Agriculture
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John Vogel
… mutant collections, transformation technology, epigenetic analysis techniques) and utilizing these resources to … interact with their microbiomes. In addition, his group conducts comparative genomic research to understand the evolutionary …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together … industry, and government organizations for three days of scientific presentation, interactive panel discussions, …
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River microbiomes from around the world: Kelly Wrighton
… have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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