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Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
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Gut Fungi: Unexpected Source of Novel Chemicals
… don’t have the energy to make complex compounds called natural products . Yet, combing through the genomes of four … unexpectedly powerful: they can whip up dozens of complex natural products, including new ones. The Impact In the … project was supported by a grant from Santa Barbara Cottage Hospital and the University of California, Santa …
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Robert Bowers
Bob uses single-cell genomics and metagenomics to explore how microbes influence people and the … and community ecology of microbes sampled from the natural environment. …
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A 34K SNP genotyping array for Populus trichocarpa: Design, application to the study of natural populations and transferability to other Populus species
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Natural Variation in Lignin and Pectin Biosynthesis-Related Genes in Switchgrass (Panicum virgatum L.) and Association of SNP Variants with Dry Matter Traits
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, … the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for the … the strategy of lysogeny. The ability of the virus to tag along with the host has earned this strategy a riff, …
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Matthew Kellom
… between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in … also supports various CSP and FICUS user projects for the Metagenome Program. …
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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Axel Visel
Laboratory and as an Adjunct Professor at the School of Natural Sciences at the University of California, Merced. … Tringe SG, Visel A , Woyke T, Wang Z, Rubin EM (2011). Metagenomic discovery of biomass-degrading genes and genomes …
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The Power of One, Amplified
… of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the … sequencing approaches including amplicon and metagenomic sequencing. For example, they showed that the … of single cell sequencing to assess the variation within natural microbial populations. Each of the three sequencing …
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