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Natural Prodcast Episode 6: Marc Chevrette
… system. [ Go here to learn more about Cameron Currie’s metagenomics research, enabled in part by JGI’s Community … have something to do with it. We saw hints of a rare advantage. So if you’re not the most popular pathogen, you can … whether it be you know, fighting with each other through antagonism or working synergistically or just tolerating each …
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Natural Prodcast Episode 15: Katherine Duncan
… exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products … structure information. You still need structure at this stage, and you still need to put that information into …
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Expanding Virophage Diversity
… approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they …
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A One-Stop Shop for Analyzing Algal Genomes
… including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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Natural Prodcast Episode 7: Ben Shen
… on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … enediynes to the market in 2001 with a drug called Mylotag. Wyeth was later acquired by Pfizer in 2009. So, a … have to think about a scientific discovery, the two major stages. So one is called “discovery”, one is called …
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Triggering Morel Fruiting
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Game On: High School Students Drive Everglades Metagenomics Study
… email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … class decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the … for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The class had to …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … viruses (from environmental metagenome samples) from IMG/VR , a database that is part of the Integrated Microbial …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Natural Prodcast Episode 8: Eric Schmidt
… end, we took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  … ended up doing was pursuing with Jacques Ravel, at TIGR, metagenome sequencing, which was very early days for that …
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DNA Synthesis Program
… in synthetic biology engineering workflows. … The IMG/M system serves as a community resource for comparative …
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Comparative proteomic profiles of the marine cyanobacterium Trichodesmium erythraeum IMS101 under different nitrogen regimes
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