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Metabolomics
JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this identification, metabolomics enables functional genome annotation, improves understanding of the role small …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address … joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have … climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … the species. Earlier pan-genomes for other plants, like the soybean relative Glycine max ( 2014 ) and the grass …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple … chromosomes of  Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those …
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A Plant Root Atlas for Tracking Developmental Trajectories
… zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly … published datasets. The work was  recently published in the journal  Developmental Cell and provides a community … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic … Ingelheim Fellow. Reviewer for major funding agencies and journals including National Institutes of Health, American …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … and developed new tools to map that soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  … (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … accepted proposals: Amanda Hurley and  Jo Handelsman of the Wisconsin Institute for Discovery (WID) are interested in …
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