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… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only … portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve …

… the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was … the project with him, I was inspired by his enthusiasm and drive to give his students this experience. My …

… of virus-host interactions and phage-based technologies for microbiome manipulation, the VEGA symposium represents a … Kathryn Kauffman, University at Buffalo Frederique Le Roux, Université de Montréal … Simon Roux Jonelle Basso Maureen Berg Emiley Eloe-Fadrosh … Jasmine Bunn , JGI Administrative Support …

… 1) Complete Sample Metadata form Sample metadata is collected via spreadsheet or entered into a web … See our Taxonomy Quick Guide. PM sends PI the sample metadata spreadsheet to fill out (or provides a link to complete …  You will receive automated emails as raw sequence data becomes available, and as analysis is completed.   …

… The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, … has a research & development group, a team that develops data science tools, and a user science group. … The MycoCosm web portal provides data access, visualization, and analysis tools for …

… train students and professors in laboratory techniques and data analyses compile original data for improving fungal genomic resources empower students … fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages …

…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  …

… so now here at the JGI, I work with all of the sequencing data that the JGI produces to try to find and identify … and to do research to get a better understanding of that data. ALISON: Awesome. So tell me why should I even care …

… many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four … cells of the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to study the … , and relying on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By analyzing the metagenomes, …

… research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … She conducted her postdoctoral training in human microbiome research at the Institute for Genome Sciences at … in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative (NMDC). Prospective users with …

… worked on ranged far and wide — from implementing new data visualization tools, to using natural language … Intern: Frank Gutierrez (graduate) Mentor: Simon Roux Click the image to watch the video …