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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … richardii, or C-fern — came out in the September issue of Nature Plants . C-fern has a genome approximately three …
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The DNA sequence and biology of human chromosome 19 . Nature. 428, 529–535 (2004). doi:10.1038/nature02399 …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Widespread natural variation of DNA methylation within angiosperms
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Anaerobic gut fungi are an untapped reservoir of natural products
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Pathway and Gene Discovery from Natural Hosts and Organisms
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Genome-reconstruction for eukaryotes from complex natural microbial communities
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Multi-chassis engineering for heterologous production of microbial natural products
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Cell-free synthetic biology for natural product biosynthesis and discovery
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