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Advantages and Limits of Metagenomic Assembly and Binning of a Giant Virus
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Assembly of Viral Metagenomes from Yellowstone Hot Springs▿ †
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… lead the Forest Pathology and Mycology Laboratory. Together with his colleague Douglas Schmidt and UC Davis professor … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … and inspire next-generation researchers while preserving biodiversity and yielding demonstrable economic benefits. … …
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Wildfire-dependent changes in soil microbiome diversity and function
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Simon Roux
… focused around developing foundational knowledge of viral diversity and virus-host interactions in microbial systems. … and evolutionary drivers of virus-host dynamics in soil microbial communities. … B.S. in Microbiology, … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …
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Comparison of soil biosolarization with mesophilic and thermophilic solid digestates on soil microbial quantity and diversity
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Ecological and genomic responses of soil microbiomes to high-severity wildfire: linking community assembly to functional potential
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our facility. This includes help with: preparing a …
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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Optimizing de novo genome assembly from PCR-amplified metagenomes
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass ( Panicum … potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. So, a team of scientists made an ambitious plan …
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Revisiting a ‘simple’ fungal metabolic pathway reveals redundancy, complexity and diversity
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