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… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic … environmental categories. Instead, families preferred a specific environment — whether that be soil, animal hosts, …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … for technical help, feedback or a guided walk-through of the new Data Portal.  …

… attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … multiple times in order to obtain enough zoospores. DNA and RNA samples generated from the zoospores were then sent to the JGI for whole genome sequencing using the Illumina platform. Unfortunately, both …

… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established … explore and reuse the data from the GROWdb for comparative analyses with their own data on the KBase platform, without …

… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and … between genome-wide 5mC abundance and the abundance of specific 5mC methyltransferase (MTase) variants. Using new …

… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … have unveiled PhycoCosm in the Nucleic Acids Research journal. The genome portal reinforces the JGI’s new strategic …

… out to characterize the transcriptome – the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under specific conditions – in over a dozen … comparative transcriptomics. *The HudsonAlpha Genome Sequencing Center works with scientists at the JGI a lot. In …

… in the sample to start with. 2. Q: What would a typical turnaround time be for data once samples are in hand at JGI? … go from start to finish, i.e., QC to separation to library sequencing and assembly. Like others, our turnaround time … the question might also hinge on if you’re interested in a specific metabolite. If you could do some sort of targeted …