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… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues have generated a … Scientific Focus Area (SFA), supported by the Terrestrial Ecosystem Science (TES) program within the DOE …

… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … duplication event — bioinformatics expertise, as well as sequencing for all global populations of eelgrass used in … ahead, scientists can use this information to assess what specific traits make older species of eelgrass in the …

… initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or … an unlimited number of proposals).  For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …

… Survey of Setaria's natural diversity reveals seed dispersal in … this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is critical for plants in the … Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on …

… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …

… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … efforts appear to be redistributing water availability. By sequencing the millet rhizosphere and endosphere communities …

… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …

… genome science capabilities to support BER's mission of achieving a predictive understanding of complex biological, earth, and environmental systems for … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …

… is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools … projects — aligned with DOE missions and from PIs who have not led any previously-accepted proposals —  through … our Community Science Program.  Below find a list of the first 10 researchers accepted for 2023. Proposals are …

… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of … specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference genomes …

… the DNA Synthesis Science User Advisory Committee, the Fungal and Algal Program User Advisory Committee, the …

… technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … provides training and scientific contributions—including sequencing services and analysis—to participants. Over the … genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many available to …