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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding … the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the human genome … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies
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BIGMAC : breaking inaccurate genomes and merging assembled contigs for long read metagenomic assembly
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. S.C., B.K., and I.V.G. were supported in part …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal … lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those for …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Genome sequence of Shimia str. SK013, a representative of the Roseobacter group isolated from marine sediment
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Genomic Analysis of “Elusimicrobium minutum,” the First Cultivated Representative of the Phylum “Elusimicrobia” (Formerly Termite Group 1)▿ †
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Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … the differentially expressed genes and visualize plots representing the GO and KEGG pathway enrichments. Detailed …
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