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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … Biology article highlights how one microalga collected from water on the ice surface handles such fluctuations. P. … the 24-hour mark, these algae showed significant signs of recovery through increased nutrient uptake and decreased …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … repository of 52,515 microbial draft genomes generated from environmental samples around the world, expanding the …
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Subsurface hydrocarbon degradation strategies in low- and high-sulfate coal seam communities identified with activity-based metagenomics
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Fungal Friends or Foes in Plant Roots
… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified …
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The rhizosphere microbiome of burned holm-oak: potential role of the genus Arthrobacter in the recovery of burned soils
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Marine Proteobacteria metabolize glycolate via the β-hydroxyaspartate cycle
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Biases in genome reconstruction from metagenomic data
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An Automated Tool for Assessing Virus Data Quality
… and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is … Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … host to replicate. Sequencing genetic material directly from samples sidesteps these challenges, since it doesn’t … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along …
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Genomic insights into the Acidobacteria reveal strategies for their success in terrestrial environments
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