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Fungal Friends or Foes in Plant Roots
… roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help determine … office building, its roots are akin to the ground floor lobby. People walking into the lobby have many reasons for … of the key community participants and enabling future metagenomics studies.   …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … internship in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev and Asaf Salamov, … to learning about how to navigate and analyze large genomic datasets during the internship, Wint also began …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough plant fibers. The … plant fibers. But are they both actually doing the job? By analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that …
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … staff to onboard users and guide them through the process of working with our facility. This includes help with: … Please review our FAQ in advance of contacting the PMO office.  …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … ensure platforms are future-ready for advancements enabled by artificial intelligence and other tools. By bringing users together through our systems, we build …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by Clarivate Analytics. This year’s list features 6,849 individual researchers from 67 countries. …
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Cultivating Symbiotic Antarctic Microbes
… have adapted to thrive in polar ecosystems. The work by Cavicchioli’s team sheds light on the range of archaeal … one or more biological organisms. One hallmark of an obligate symbiont—entirely dependent on the other for … Hrr. lacusprofundii for them. One of the most distinctive features of the Nanohaloarchaeota was discovered with …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in … the need for a more comprehensive exploration of genomic DNA modifications (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University of Georgia and including …
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Genomics of wood-degrading fungi
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … term you prefer. In this episode we’re going to finish up by talking about the modern, post-golden age history of … of biology. You know, I’ve personally been able to work in genomics, in protein structure, in synthetic biology, …
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Salicylic acid activates poplar defense against the biotrophic rust fungus Melampsora larici‐populina via increased biosynthesis of catechin and proanthocyanidins
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