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Giant virus diversity and host interactions through global metagenomics
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A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses
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Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities
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Natural Prodcast Episode 22: Alison Narayan
… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … so starting from some of the enzymes that we had the most data on and knew the most about, working with my …
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Towards a genome-based virus taxonomy
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Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2024)
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Virus taxonomy proposal summaries: a searchable and citable resource to disseminate virus taxonomy advances
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Clustering Categorical Data
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Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome
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DOE Metrics
…     2,208     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … on new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… fungal mitochondrial genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science … time. They also discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public … data, they developed a two-stage metagenomic detection pipeline: First, they scanned over 26,000 publicly available …
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The JGI Data Portal: Improving User Experience
… agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from … download processes from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome …
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