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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) … Automated Laboratories: Integrating Experimentation with Data.” The event will take place at the Seattle Marriott … to stay informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers … Synthetic Biology Informatics Group : a team that develops data science tools for workflow management and novel … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … over 1,000 metagenomes and established standardized sequencing protocols so that researchers could compare …
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Len Pennacchio
JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, DNA … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast … influences human disease/biology. Assessing and exploiting next generation sequencing technologies for applications in …
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MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome … recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). …
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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CSP Functional Genomics
Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … form and are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single … and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools have … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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The BioMart community portal: an innovative alternative to large, centralized data repositories
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI Community Science … and stark the biogeographic boundary is between them. The data is somewhat beautiful in that regard,” said Andy Allen, … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… his team then linked those species-level observations with data on microalgal communities across different ocean … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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