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Triggering Morel Fruiting
Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … and annotations are available on JGI’s fungal portal  MycoCosm . Based on these analyses, we conducted further …
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Natural Prodcast Episode 22: Alison Narayan
… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … so starting from some of the enzymes that we had the most data on and knew the most about, working with my …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, … are available for comparative analysis on JGI’s plant data portal  Phytozome , which is a community repository and … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Homepage
…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… to advance foundational science, creating opportunities for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at …
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Natural Prodcast Episode 19: Bill Fenical
… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of … time, we found another molecule. This time it was from a fungal strain collected from sediments in the ocean. No, … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Natural Prodcast Episode 16: Marcy Balunas
And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … what we know is they’re quite selective in some way for antifungal activity. They are also, some of them, are … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics … FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should … and metabolomics. Submission Deadline Check back Spring 2026 for the FY27 call Check back Spring 2026 for the FY27 …
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Sequencing Technologies
… significantly lowering costs. Staff process samples, perform quality checks, and prep libraries for sequencing. They apply Lean Six Sigma practices to … with the Project Management Office to help ensure the JGI’s genomic capabilities are ready and applicable to users.  … …
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The BioMart community portal: an innovative alternative to large, centralized data repositories
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out to the future of the institution. Their … of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari Patrinos , Former Director of DOE’s …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications.   … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial …
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