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Epicuticular wax accumulation and regulation of wax pathway gene expression during bioenergy Sorghum stem development
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Enlarging Windows into Understanding Gene Functions
… connections between the structures and functions of the genes encoded in the genome sequence is part of the … The technology expresses the transcription factor proteins from a DNA template amplified directly from either genomic … to conduct comparative analyses across the genomes of multiple species in a single experiment. “Effectively, you …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … scientists have shown at least two microorganisms from different phyla are capable of methanogenesis. Using … JGI and EMSL. New Methane-Makers Have Alternate Metabolic Pathways And there is something special about these new …
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JGI@25: From Life at the Extremes to Editing Genomes
… collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around the world, … refine and improve the process of finding novel Cas genes and CRISPR systems. The collaboration has resulted in … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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The Exometabolome of Xylella fastidiosa in Contact with Paraburkholderia phytofirmans Supernatant Reveals Changes in Nicotinamide, Amino Acids, Biotin, and Plant Hormones
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Viral Genomics Group
… abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Multiple displacement amplification compromises quantitative analysis of metagenomes
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… more than two copies, a condition known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic … you evolved from’,” he said. “This approach could work if genes from all possible candidate ancestors are available. …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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Yasuo Yoshikuni
… transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains., Microbial … Discovering untapped biochemistry in microorganisms from hidden corners. Nature Review Microbiology , 2022 … … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …
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Game On: High School Students Drive Everglades Metagenomics Study
… that the project had already received enthusiastic support from the JGI Director, Nigel Mouncey. Jonathan credits his … analysis.  The class had to sift through over 55 billion genes and 16 trillion DNA bases of data, to figure out what … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Oxidative Pathways of Deoxyribose and Deoxyribonate Catabolism
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