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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC … objectives for the JGI’s data science, informatics and information technology (IT) activities and strategic plan. …
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Extracting the Secrets of Secondary Metabolites
… CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary … and other industries — yet there’s still so much about them we don’t know.  Unlocking the power of secondary … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex wiring … from grasses to broccoli and trees like poplar, spanning about 150 million years of evolution,” said Leo Baumgart, …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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Novel Structural Elements within the Nonproteolytic Clostridium botulinum Type F Toxin Gene Cluster
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … bookmarked v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome … v13. Below are some answers to Frequently Asked Questions about the transition from Phytozome v12 to v13. Why is it …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research … network of enzymes in plants. To better pinpoint the biosynthetic routes that produce terpenes, the JGI … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species
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Heterologous Expression and CRISPR/Cas9-Assisted Manipulation of the Hybrid Gene Cluster Specifying the Biosynthesis of Meroterpenoids and Phenazines
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Clustering Categorical Data
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Effect of oxygen minimum zone formation on communities of marine protists
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an … They then used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on the list. … This work was supported by the United States Department of Agriculture National Institute of Food …
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