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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …
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Creating an Energy Market for Miscanthus
… and a potential fuel for the future. But, to be competitive in the market, both energy policy and Miscanthus will need some upgrades. In this episode, hear from scientists working on … biology and the economic terrain to help make the plant a viable alternative to fossil fuels. …
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High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … sequencing allows researchers to study the entire genetic makeup of these communities via whole genome … scientists can tell about its function or its origin. As a result, these genes were typically discarded from any …
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Gene duplication and genetic innovation in cereal genomes
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The quantitative genetics of gene expression in Mimulus guttatus
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … for over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse … to select that family. JBrowse, keyword search, and BLAST result links will NOT be forwarded. You can find the v13 …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Marker-free carotenoid-enriched rice generated through targeted gene insertion using CRISPR-Cas9
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … of both plant and animal cells, it shares nearly 7,000 genes with other organisms (a third of those shared by both … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Transcriptional Responses of the Bdtf1-Deletion Mutant to the Phytoalexin Brassinin in the Necrotrophic Fungus Alternaria brassicicola
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