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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place … including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. The Science The … carbon and nitrogen fixers in alpine and high latitude ecosystems, deciphering their internal molecular mechanisms can …
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Ten Years of Maintaining and Expanding a Microbial Genome and Metagenome Analysis System
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The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata
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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To Create an Annotated GenBank File There are …
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IMG/M: integrated genome and metagenome comparative data analysis system
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild … genome infrastructure with a reasonably accessible system,” said Schmutz. “Building the pan-genome and …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our … genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual … to planned upgrade of the Laboratory Information Management System (LIMS) and temporary shut down of the sequencing …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a … Agency declared the North Railroad Avenue Plume (NRAP) a Superfund site. The chemical PCE (perchloroethylene) found its … the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since identified  …
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Improving Microbial Genome Annotations in an Integrated Database Context
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