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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable … research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon …
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Prokaryote Program User Advisory Committee
… The Prokaryote Advisory Committee is chartered to offer advice, … scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs' …
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Comparative Genomics Using the Integrated Microbial Genomes and Microbiomes (IMG/M) System: A Deinococcus Use Case
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Visualizing metagenomic and metatranscriptomic data: A comprehensive review
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Nikos Kyrpides
… Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the … analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and … He did his postdoctoral studies with Carl Woese at the University of Illinois at Urbana-Champaign and at Argonne …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Eloe-Fadrosh noted that it was a nice … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Silver age of GOLD introduces new features
… sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … including the Integrated Microbial Genomes & Microbiomes (IMG/M) system, enhancing genome annotations and promoting … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive … model with PhycoCosm, how do we go about getting it in your system? A: I think the best way is to contact us for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some … This research was supported in part by the Allen Distinguished … Investigator Program, through The Paul G. Allen Frontiers Group, the National Science Foundation (MCB-1244557 to …
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The integrated microbial genomes system: an expanding comparative analysis resource
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean … was developing a high quality node for cacao used for systemic orthology to enable use for both cacao functional … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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