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From Competition to Cooperation
… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those for which there were previously no genomes of symbiotic species available: 73 saprotrophs and …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … cause diseases, and produce antibiotics. Still, the team estimates that genomic information is only available for a … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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IMG ER: a system for microbial genome annotation expert review and curation
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … these three chromosomes. These sequences account for approximately 12% of the total human genome, which itself was … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … carbon storage — skills that matter increasingly as the climate warms. However, these are complicated interactions to … remarkably similar functions across different forests. Primary metabolism, cell activity, and fungal development …
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Natural Prodcast Episode 6: Marc Chevrette
You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … to use against plant pathogens to use in agriculture and animal husbandry. So we’re looking for those kinds of … talk about looking for antibiotics that could be used in animal husbandry, for example, is that microbiologists have …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … I believe it’s both. The technical hurdles now are minimal. I tell anybody who comes into my lab who’s worked with … chromosomes. So if you have one of these fungi, can you imagine eight chromosomes and 300 contigs. So this is a …
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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone … the goal is to create an entirely human-generated yeast genome. …
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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Genome Sequence of Methanosarcina soligelidi SMA-21, Isolated from Siberian Permafrost-Affected Soil
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