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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal … PDF] End-of-year Goal – Develop one new computationally enabled approach to analyze complex genomic datasets. …
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Diverse events have transferred genes for edible seaweed digestion from marine to human gut bacteria
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A Novel Freshwater to Marine Evolutionary Transition Revealed within Methylophilaceae Bacteria from the Arctic Ocean
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically … work shows that anaerobic fungi might be a new source of novel compounds to help bolster the bioeconomy. Summary A … The team’s research at both the JGI and EMSL was enabled by the Facilities Integrating Collaborations for …
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Rex Malmstrom
… of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. … molecular biology reactions, increase throughput, and enable processing of samples that would not be possible with … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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The Switchgrass Genome: Tools and Strategies
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … that showcase our collaborations and capabilities to enable great science that will help solve energy and … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on …
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Neurospora intermedia from a traditional fermented food enables waste-to-food conversion
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Characterization of digestate microbial community structure following thermophilic anaerobic digestion with varying levels of green and food wastes
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Computational Strategies for Scalable Genomics Analysis
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Finding the Fermenters
… called fermentation. To better understand the range of bacteria and archaea that rely on this form of metabolism, … the research community brings together the data resources enabled by the DOE Biological and Environmental Research … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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