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Variation and Inheritance of Small RNAs in Maize Inbreds and F1 Hybrids  
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple …
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David Goodstein
… gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative … GENESPACE tracks regions of interest and gene copy number variation across multiple genomes.  eLife 11, e78526. Li et … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research … , researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …
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Plant compartment and genetic variation drive microbiome composition in switchgrass roots
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Variation in Root Exudate Composition Influences Soil Microbiome Membership and Function
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Considering Strain Variation and Non-Type Strains for Yeast Metabolic Engineering Applications
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Genetic variation in PNPLA3 confers susceptibility to nonalcoholic fatty liver disease
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … to the amount of within species recombination, indicating variation in gene flow between the analyzed community …
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