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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, and …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … products field as it relates to structure elucidation and genome mining, and how we might start to better connect … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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Dynamic genome evolution in a model fern
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CSP New Investigator Call
… initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals …
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Extreme overall mushroom genome expansion in Mycena s.s. irrespective of plant hosts or substrate specializations.
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The Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies
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Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, … Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to develop …
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