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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by Clarivate Analytics. This year’s list features 6,849 …
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The genomic landscape of molecular responses to natural drought stress in Panicum hallii
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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
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Genome Sequence of Thermofilum pendens Reveals an Exceptional Loss of Biosynthetic Pathways without Genome Reduction▿ †
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Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding … feedstocks and understanding and ultimately assisting the adaptation of plants to changing environments. … AB in … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … This is due to the overreliance on a few species like Arabidopsis or rice as homology models for computational … difficult. Our Plant Gene Atlas resource addresses that by providing standardized experimental conditions, tissue …
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Drought shifts sorghum root metabolite and microbiome profiles and enriches for pipecolic acid
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Genetic and Functional Diversity Help Explain Pathogenic, Weakly Pathogenic, and Commensal Lifestyles in the Genus Xanthomonas
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