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Evolutionary Analyses of Gene Expression Divergence in Panicum hallii: Exploring Constitutive and Plastic Responses Using Reciprocal Transplants
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Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems
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Viruses control dominant bacteria colonizing the terrestrial deep biosphere after hydraulic fracturing
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Microbial colonization and persistence in deep fractured shales is guided by metabolic exchanges and viral predation
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Novel candidate taxa contribute to key metabolic processes in Fennoscandian shield deep groundwaters
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights … set of genes present in archaea with metabolisms involving methyl-coenzyme M reductase (MCR), the final step in …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … uncover evolutionary origins and mechanisms of pathogenesis . Science. 2006 Sep 1;313(5791):1261-6. doi: …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science … The best-known example of a modified DNA base is a methylation of the base cytosine at the 5th position on its … – similar to the MAC clusters for 6mA), rather than in genes, which suggests that 5mC may play a role in genome …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as …
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The landscape of Chlamydomonas histone H3 lysine 4 methylation reveals both constant features and dynamic changes during the diurnal cycle
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” … with. So transformation, or manipulation of the DNA of genes and bacteria, occurred much faster earlier than they … But, this one could be really good because, hey, it had a methyltransferase that changed. And, you know, I wish we …
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Model Choice, Missing Data, and Taxon Sampling Impact Phylogenomic Inference of Deep Basidiomycota Relationships.
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