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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff … user facility located at Lawrence Berkeley National Laboratory ( Berkeley Lab ), and part of the Biosciences Area. The …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic algae. But human-induced climate change , a new … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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Genomic and exoproteomic diversity in plant biomass degradation approaches among Aspergilli
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , … ) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE … and from the FRM/FSER (FRM/FSER202302017064) to P.-M.D., from the CNRS to P.-M.D. and H.P. (80|PRIME …
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Complementary Metagenomic Approaches Improve Reconstruction of Microbial Diversity in a Forest Soil
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Filling in the Plant Tree of Life
… What if we understood plants and how they adapt to their ever-changing environments better? We could unlock new innovations to …
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your … 2.  Q(uestion): Do you publish the data sets the trees are based upon? A: This is still work in progress as new genomes …
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PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … analysis beyond the reference set, using two additional approaches. To search environmental data, they developed a … The work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched … call . This represents a unique opportunity for researchers to request the capabilities and expertise of both national … accelerating discoveries and developing transformative bio-based technologies that address challenges in the sourcing, …
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