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Genome-sequenced bacterial collection from sorghum aerial root mucilage
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Taking Stock of the Known and Unknown Microbial Space
… hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all …
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Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
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A Catalog of Reference Genomes from the Human Microbiome
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Genome sequence of the Litoreibacter arenae type strain (DSM 19593T), a member of the Roseobacter clade isolated from sea sand
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … rapid diagnoses for SOD. These techniques were also instrumental in tracing the genetic signature of the organism …
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Disclaimer
NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … With respect …
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CSP Functional Genomics
Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … synthesis and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … form and are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … tools, allows  Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy … of Energy under Contract No. DE-AC02-05CH11231. The collection of the M. sinensis and M. sacchariflorus …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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