Results

ChIP-seq accurately predicts tissue-specific activity of enhancers
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A simple, fast, and accurate method of phylogenomic inference
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Whole genome assembly from 454 sequencing output via modified DNA graph concept
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Enhancing Terpene Yield from Sugars via Novel Routes to 1-Deoxy-d-Xylulose 5-Phosphate
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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A roadmap for equitable reuse of public microbiome data
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… 300 genomes spanning the fungal kingdom's full taxonomic breadth. Across this set, the same 15 core genes — 14 … next step applied metagenomic binning (grouping sequencing reads by their likely organism of origin) followed by … JGI’s strategic effort to generate 10,000 high-quality, AI-ready fungal genomes, this work directly supports the DOE’s …
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Generation of Long Insert Pairs Using a Cre-LoxP Inverse PCR Approach
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Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7
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Plant Microbial Interactions Group
… Selected Publications …
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