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Prokaryote Program User Advisory Committee
The Prokaryote Advisory Committee is chartered to offer advice, … on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. … scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs’ …
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
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Webinars on Offerings & Capabilities
Below are a list of webinars that can help you through the submission … understanding the capabilities and resources available for your project. Watch all the webinars here . You can find … … … Shining a Light: Advanced Photon Source Capabilities for FICUS Research shows researchers how to tap into the …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the … patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements metagenomics studies. The Science …
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the DOE …
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Laminarin stimulates single cell rates of sulfate reduction whereas oxygen inhibits transcriptomic activity in coastal marine sediment
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GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes
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Kanwar Singh
Kanwar spends part of his time assisting JGI users by processing their single cell samples using our high throughput pipeline. He also …
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Reconstructing each cell's genome within complex microbial communities—dream or reality?
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial … In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced … metatranscriptomes), as well as the genomes of single cells of the uncultivated SAR324. The constellation …
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